Information for 12-TGCAGACGTG (Motif 19)

A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G
Reverse Opposite:
A G T C G T C A A T G C T A C G G C A T A G T C C G A T A C T G A T G C T G C A
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.842
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif91.1
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.6 +/- 31.4bp
Average Position of motif in Background55.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGCAGACGTG-
-CCAGACRSVB
 A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZBTB18/MA0698.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGCAGACGTG-
CATCCAGATGTTC
 A C G T A C G T A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G A C G T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGCAGACGTG-
---RTACGTGC
 A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

CREB3L1/MA0839.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCAGACGTG----
TGATGACGTGGCAN
 A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G A C G T A C G T A C G T A C G T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGCAGACGTG-
---GGACGTGC
 A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

XBP1/MA0844.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGCAGACGTG-----
-GATGACGTGGCANT
 A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGCAGACGTG
TCCAGATGTT
 A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGCAGACGTG-
-GGGTACGTGC
 A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGCAGACGTG----
NGATGACGTGGCAN
 A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G A C G T A C G T A C G T A C G T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGCAGACGTG
-CCAGACAG-
 A C G T A T C G A G T C C G T A A C T G C G T A A T G C A T C G A C G T A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T