Information for 11-AATTTATCGG (Motif 18)

C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G
Reverse Opposite:
A G T C G T A C A C T G C G T A A C G T C T G A C G T A C G T A A G C T A C G T
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.5 +/- 19.4bp
Average Position of motif in Background29.2 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AATTTATCGG-
-TTTTATKRGG
 C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AATTTATCGG
NTTTTATTGG
 C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AATTTATCGG
TTTTTATTGG
 C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AATTTATCGG---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATTTATCGG-
-TTTTATTRGN
 C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AATTTATCGG
NTTTTATTGG
 C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AATTTATCGG---
NNANTTTTATTGGNNN
 A C G T A C G T A C G T C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AATTTATCGG-
NTGATTTATGGCC
 A C G T A C G T C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AATTTATCGG-
TGATTTATGGCC
 A C G T C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AATTTATCGG-
DGWTTTATGRCN
 A C G T C G T A C T G A A C G T A C G T A G C T G T C A A C G T T A G C A C T G A C T G A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C