Information for 7-CAGCTGCTGCMYSCCW (Motif 12)

A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G A T G C C T G A A C T G A T C G A G T C G C T A A T C G G T A C C T G A A C T G T A G C C G A T A T C G
p-value:1e-10
log p-value:-2.387e+01
Information Content per bp:1.748
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.1 +/- 24.9bp
Average Position of motif in Background57.3 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGCTGCMYSCCW
NCAGCTGCTG-------
 A C G T A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCTGCMYSCCW
AGCAGCTGCTNN------
 A C G T A C G T A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTGCTGCMYSCCW
CTCAGCAGCTGCTACTG----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGCTGCMYSCCW
NVCAGCTGBBNN------
 A C G T A C G T A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCTGCMYSCCW
NNACAGCTGC---------
 A C G T A C G T A C G T A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCTGCMYSCCW
AGCAGCTGCT--------
 A C G T A C G T A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCTGCMYSCCW
GACAGCTGCAG-------
 A C G T A C G T A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGCTGCTGCMYSCCW
CAGCTGNT--------
 A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCTGCMYSCCW
TGCAGCTGTCCCT-----
 A C G T A C G T A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCTGCMYSCCW
AACAGCTGCAG-------
 A C G T A C G T A T G C C G T A A C T G A G T C A G C T A C T G A T G C C A G T A C T G A T G C G T A C A G C T A T C G G T A C A G T C C G A T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T