Information for 3-YAGRCAGGSAGGMAGK (Motif 5)

A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G
Reverse Opposite:
G T A C A G T C A C G T A C T G A G T C A G T C A C G T A T C G A G T C A G T C A C G T A C T G A G T C A G T C A C G T C T A G
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.866
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.9 +/- 8.3bp
Average Position of motif in Background42.9 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--YAGRCAGGSAGGMAGK
GGAAGGAAGGAAGGAAGG
 A C G T A C G T A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YAGRCAGGSAGGMAGK
SCAGYCADGCATGAC--
 A C G T A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:YAGRCAGGSAGGMAGK-
-------ACAGGAAGTG
 A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:forward strand
Alignment:YAGRCAGGSAGGMAGK-
-------ACAGGAAGTG
 A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YAGRCAGGSAGGMAGK
-TGGCAGNCTGCCAG-
 A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:YAGRCAGGSAGGMAGK-
-------AGAGGAAGTG
 A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:YAGRCAGGSAGGMAGK
------ANCAGGAAGT
 A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YAGRCAGGSAGGMAGK--
------NDCAGGAARTNN
 A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:YAGRCAGGSAGGMAGK
------AVCAGGAAGT
 A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-YAGRCAGGSAGGMAGK
CCAGACAG---------
 A C G T A G T C G T C A A C T G C T A G A G T C C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T A C C G T A A C T G C A T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T