Information for 7-GCCCMKSRTGGRSCRG (Motif 11)

A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G
Reverse Opposite:
A G T C G A C T A C T G A T G C A G C T A G T C A G T C C G T A A G C T A T G C G T A C C A G T A C T G A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.680e+01
Information Content per bp:1.819
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif23.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.4 +/- 27.2bp
Average Position of motif in Background50.2 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCCMKSRTGGRSCRG
DCHCAGCAGGRGGCC-
 A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCCMKSRTGGRSCRG
TGCCCAGNHW-------
 A C G T A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCCCMKSRTGGRSCRG-----
----NNTNNGGGGCGGNGNGN
 A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCCMKSRTGGRSCRG
CACCCCCGGGGGGG---
 A C G T A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCCMKSRTGGRSCRG
TGCCCTGAGGGCA----
 A C G T A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCCCMKSRTGGRSCRG----
----NNTNAGGGGCGGNNNN
 A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCCCMKSRTGGRSCRG
TGCCCTNAGGGCA----
 A C G T A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCCCMKSRTGGRSCRG---
----AAGGKGRCGCAGGCA
 A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCCCMKSRTGGRSCRG
TGCCCTGAGGGCA----
 A C G T A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCCCMKSRTGGRSCRG
CCACACAGCAGGAGA---
 A C G T A C G T A C T G A G T C A G T C A G T C G T A C A C T G A T C G C T G A A C G T A C T G A C T G T C A G A T C G A G T C C T A G A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T