Information for 11-GCCAATGGGA (Motif 10)

C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A
Reverse Opposite:
C A G T T A G C T G A C G A T C G T C A C G A T G A C T T C A G C T A G G T A C
p-value:1e-12
log p-value:-2.886e+01
Information Content per bp:1.655
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.64%
Number of Background Sequences with motif912.4
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets57.7 +/- 29.8bp
Average Position of motif in Background50.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GCCAATGGGA
AGCCAATCGG-
 A C G T C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCCAATGGGA---
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCAATGGGA
TGCCAA-----
 A C G T C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------GCCAATGGGA
AAATGGACCAATCAG-
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCCAATGGGA
CGTGCCAAG----
 A C G T A C G T A C G T C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCCAATGGGA
ACTAGCCAATCA--
 A C G T A C G T A C G T A C G T C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCAATGGGA
GGTGCCAAGT---
 A C G T A C G T A C G T C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCAATGGGA-----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCAATGGGA
GACAATGNN-
 C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCAATGGGA--
NTGCCCTTGGGCGN
 A C G T A C G T C A T G G A T C A G T C C T G A G C T A C A G T C T A G A C T G A T C G G T C A A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G