Information for 12-AGGTCCAGCG (Motif 38)

C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C G T
p-value:1e-6
log p-value:-1.464e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 26.8bp
Average Position of motif in Background34.1 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGTCCAGCG-
-GGTCCCGCCC
 C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G A C G T
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGTCCAGCG
CAAAGGTCAAGGG
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AGGTCCAGCG
-----CAGCC
 C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGGTCCAGCG-----
NNNANTGCAGTGCNNTT
 A C G T A C G T C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCCAGCG
GACAGGTGTN---
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGTCCAGCG
AACAGGTGT----
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCCAGCG
NNCAGGTGCG---
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGTCCAGCG
GAGSCCGAGC-
 A C G T C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGGTCCAGCG
SDGCAGGTGCNS--
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGTCCAGCG
AGGTCA----
 C G T A A C T G A C T G A C G T A T G C A G T C C G T A A C T G A G T C A C T G
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T