Information for 20-TGAATTTACCTTC (Motif 31)

A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 33.5bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGAATTTACCTTC
NNNNTGAATTCANNNC-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGAATTTACCTTC
-NNACTTACCTN-
 A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGAATTTACCTTC-
----ATGACCTTGA
 A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATTTACCTTC
NNTNTCATGAATGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGAATTTACCTTC-
----NTGACCTTGA
 A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGAATTTACCTTC
GGGAATTTCC----
 A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGAATTTACCTTC
--TRTTTACTTW-
 A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGAATTTACCTTC
ATGMATATDC----
 A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGAATTTACCTTC-
---NATGACCTTGA
 A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGAATTTACCTTC-
--ASTTTCACTTCC
 A C G T A C T G C G T A C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C