Information for 19-TGTGTGGACAAAA (Motif 30)

C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A
Reverse Opposite:
A G C T A C G T A G C T C G A T A C T G G C A T A G T C G T A C C G T A A G T C C G T A G A T C G C T A
p-value:1e-7
log p-value:-1.750e+01
Information Content per bp:1.780
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets30.1 +/- 20.5bp
Average Position of motif in Background47.8 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTGTGGACAAAA--
TACATGTGCACATAAAA
 A C G T A C G T C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGGACAAAA-
NNGTATGTGCACATNNN
 A C G T A C G T A C G T C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGGACAAAA
NNHTGTGGTTWN--
 A C G T C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGTGTGGACAAAA
---GTGGAT----
 C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTGTGGACAAAA----
NSTGTTTRCWCAGBNNN
 C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTGTGGACAAAA
CNTGTTTACATA-
 C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTGTGGACAAAA
GGTGYTGACAGS-
 C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGGACAAAA-
BSNTGTTTACWYWGN
 A C G T C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTGTGGACAAAA
--TGTGGATTNNN
 C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTGTGGACAAAA--
AAAATGTAAACAAACAG
 A C G T A C G T C A G T C T A G A C G T A C T G A C G T A C T G C T A G C G T A A G T C C G T A C T G A C G T A T C G A A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G