Information for 15-AGTGTGTGAATGGAAT (Motif 20)

C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T
Reverse Opposite:
C T G A G C A T A C G T A G T C A G T C C G T A A C G T A C G T A T G C C G T A A G T C C T G A A G T C C G T A A T G C A G C T
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.3 +/- 16.7bp
Average Position of motif in Background41.2 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGTGTGTGAATGGAAT-
NTTNTATGAATGTGNNC
 C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAATGGAAT
AAGGTGTKAA------
 C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTGTGTGAATGGAAT
NNGCGTGTGTGCNGCN---
 A C G T A C G T A C G T C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAATGGAAT
AAGGTGTGAA------
 C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGTGTGTGAATGGAAT----
-----TTGAATGAAATTCGA
 C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGTGTGTGAATGGAAT--
--ACTATGAATGAATGAT
 C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T A C G T A C G T
A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAATGGAAT
AAGGTGTGAAA-----
 C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTGTGTGAATGGAAT
AAGGTGTGAAAAT---
 C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTGTGTGAATGGAAT
-AGGTGTGAAA-----
 C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AGTGTGTGAATGGAAT--
--------NCTGGAATGC
 C T G A A T C G A C G T A C T G A G C T A C T G A C G T A T C G T G C A G T C A A C G T A C T G A C T G T G C A C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C