Information for 16-CAAGGCTACC (Motif 31)

A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C
Reverse Opposite:
A C T G A T C G A C G T C T G A A C T G A T G C A T G C A G C T A C G T A C T G
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.850
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif111.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets46.3 +/- 27.0bp
Average Position of motif in Background50.0 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAAGGCTACC
CAAGGHCANV
 A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGCTACC
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAGGCTACC------
ACATGCTACCTAATAC
 A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAAGGCTACC
NTCAAGGTCA--
 A C G T A C G T A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAGGCTACC
BTCAAGGTCA--
 A C G T A C G T A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAAGGCTACC------
CNNNGCTACTGTANNN
 A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CAAGGCTACC
TTGCCATGGCAACN
 A C G T A C G T A C G T A C G T A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAAGGCTACC--
TACCCTAGTTACCGA
 A C G T A C G T A C G T A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAAGGCTACC------
ACTTGCTACCTACACC
 A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAAGGCTACC------
TNNTGCTACTGTNNNN
 A G T C G T C A C T G A T A C G A T C G A G T C A G C T T G C A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T