Information for 14-AAATCCACTC (Motif 26)

G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C
Reverse Opposite:
T C A G C G T A C T A G C A G T A C T G A C T G T G C A C G A T A C G T A C G T
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.787
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif394.2
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets40.6 +/- 25.7bp
Average Position of motif in Background49.8 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AAATCCACTC-
SSAATCCACANN
 A C G T G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAATCCACTC
TCCAATCCACA-
 A C G T A C G T G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AAATCCACTC
--ATCCAC--
 G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AAATCCACTC
CTAATCCTCTT
 A C G T G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAATCCACTC------
TAAGCCACTTGAATTT
 G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAATCCACTC------
TAAGCCACTTGAAATT
 G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAATCCACTC------
TAAGCCACTTAACATT
 G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AAATCCACTC--
--MRSCACTYAA
 G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAATCCACTC------
TAAGCCACTTGAAATT
 G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAATCCACTC--
--AASCACTCAA
 G T C A C G T A C G T A A C G T A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A