Information for 13-GGCCAGCCTCCTG (Motif 20)

A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G C G T A A C T G A C T G A G T C A C G T A T C G A C T G A G T C A G T C
p-value:1e-8
log p-value:-2.004e+01
Information Content per bp:1.965
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.5 +/- 26.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCCAGCCTCCTG--
GCCCCGCCCCCTCCC
 A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCCAGCCTCCTG----
TACGAGACTCCTCTAAC
 A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGCCAGCCTCCTG--
-----ACATCCTGNT
 A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGCCAGCCTCCTG--
-----ACTTCCTGTT
 A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGCCAGCCTCCTG--
-----NNCACCTGNN
 A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGCCTCCTG
GGCCCCGCCCCC--
 A C G T A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGCCAGCCTCCTG-
----CACTTCCTGT
 A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGCCAGCCTCCTG
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCCAGCCTCCTG--
---CCCCCTGCTGTG
 A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCCAGCCTCCTG
---CAGCC-----
 A C T G A C T G A G T C A T G C C G T A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T