Information for 6-YAGGMYGKCATTC (Motif 11)

A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T C A T G T G A C A G T C C T A G A C G T A G T C A T G C A C G T C T A G
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.847
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 24.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--YAGGMYGKCATTC-
NGTAGGTTGGCATNNN
 A C G T A C G T A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:YAGGMYGKCATTC-
--GSCTGTCACTCA
 A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C A C G T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:YAGGMYGKCATTC--
---NCTGTCAATCAN
 A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:YAGGMYGKCATTC
--GGTTGGCAT--
 A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:YAGGMYGKCATTC--
---SCTGTCAVTCAV
 A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:YAGGMYGKCATTC---
------CACATTCCAT
 A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.59
Offset:7
Orientation:forward strand
Alignment:YAGGMYGKCATTC--
-------ACATTCCA
 A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:YAGGMYGKCATTC----
-------RCATTCCWGG
 A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YAGGMYGKCATTC--
AGGGAAGTCATTTCT
 A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

ATF7/MA0834.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YAGGMYGKCATTC
NGATGACGTCATNN
 A C G T A G T C G T C A A T C G A C T G G T C A G A T C T C A G A C T G G A T C C G T A A C G T A C G T A G T C
A G T C C A T G T C G A G A C T A C T G G T C A A G T C T C A G G A C T G T A C G T C A A G C T G A T C T C A G