Information for 20-CTATTAAACT (Motif 26)

T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T
Reverse Opposite:
C G T A T C A G A C G T G A C T G A C T C G T A G T C A A G C T C T G A A T C G
p-value:1e-9
log p-value:-2.287e+01
Information Content per bp:1.677
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets49.0 +/- 26.5bp
Average Position of motif in Background38.0 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CTATTAAACT
--ATTAAA--
 T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTATTAAACT
NGCAATTAAA--
 A C G T A C G T T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CTATTAAACT--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CTATTAAACT--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTATTAAACT
NCYAATAAAA-
 A C G T T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTATTAAACT
GCTCGTAAAAA
 A C G T T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTATTAAACT--
--GCTAAACGGT
 T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T A C G T A C G T
A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTATTAAACT
CCAATAAAAA
 T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTATTAAACT---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTATTAAACT
CCYMATAAAA-
 A C G T T A G C G A C T T C G A A C G T G A C T C G T A C T G A T G C A A G T C G A C T
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T