Information for 3-CCCACAAGGCCSW (Motif 2)

A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
Reverse Opposite:
C G A T A T G C T C A G A C T G G T A C G T A C A G C T A G C T A T C G A C G T A C T G A C T G A C T G
p-value:1e-13
log p-value:-3.069e+01
Information Content per bp:1.789
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 25.6bp
Average Position of motif in Background48.4 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCCACAAGGCCSW
ATTTCCCAGVAKSCY--
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCCACAAGGCCSW-
TACCCACAATGCATTG
 A C G T A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCCACAAGGCCSW
NWAACCACADNN----
 A C G T A C G T A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCACAAGGCCSW
TGCCCTGAGGGCA--
 A C G T A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCACAAGGCCSW
AAACCACAGAN----
 A C G T A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCACAAGGCCSW
TGCCCNNAGGGCA--
 A C G T A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCACAAGGCCSW
TGCCCTNAGGGCA--
 A C G T A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCACAAGGCCSW
ATCCAC--------
 A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCCACAAGGCCSW
YCCGCCCACGCN-----
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCACAAGGCCSW
TGCCCCCGGGCA--
 A C G T A G T C A G T C G T A C C G T A A T G C C T G A C T G A A C T G C A T G A G T C A G T C T A C G G C T A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T