Information for 5-CGGTCGGCTTCGGGGC (Motif 15)

A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G C G T A A T G C T A G C C T A G
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 22.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CGGTCGGCTTCGGGGC
------GCTTCC----
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGTCGGCTTCGGGGC
-GCTCGGSCTC-----
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGGTCGGCTTCGGGGC-
----TGCCCTNAGGGCA
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CGGTCGGCTTCGGGGC--
------GCCTCAGGGCAT
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

ELK4/MA0076.2/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CGGTCGGCTTCGGGGC
----CCACTTCCGGC-
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGGTCGGCTTCGGGGC
---NCCACTTCCGG--
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C
A C G T A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CGGTCGGCTTCGGGGC-
-----TGCCCNGGGGCA
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CGGTCGGCTTCGGGGC
------ACTTCCGGNT
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGGTCGGCTTCGGGGC-
----TGCCCTGAGGGCA
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CGGTCGGCTTCGGGGC--
------SCCTSAGGSCAW
 A G T C A T C G A T C G A C G T A G T C A C T G A C T G A G T C A C G T A C G T A G T C C T A G C T A G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T