Information for 9-CACCACAATGGCT (Motif 11)

G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 13.5bp
Average Position of motif in Background76.1 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACCACAATGGCT
NWAACCACADNN---
 A C G T A C G T G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CACCACAATGGCT
---AACAAAGG--
 G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CACCACAATGGCT
---RACAAWGG--
 G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CACCACAATGGCT--
---CAAGATGGCGGC
 G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACCACAATGGCT
-VRAACAATGG--
 G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACCACAATGGCT
-RNAACAATGG--
 G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CACCACAATGGCT
---GACAATGNN-
 G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACCACAATGGCT-
CTCACACAATGGCGC
 A C G T G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACCACAATGGCT
-VRRACAAWGG--
 G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACCACAATGGCT
NAAACCACAG-----
 A C G T A C G T G T A C C G T A A G T C A G T C C G T A G T A C C G T A C G T A A C G T C T A G A C T G G T A C A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T