Information for 22-GGCCTGAGTGYCA (Motif 38)

A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A
Reverse Opposite:
A C G T A C T G C T G A A G T C G T C A G T A C A C G T A G T C C G T A T A C G A T C G A T G C T G A C
p-value:1e-3
log p-value:-9.169e+00
Information Content per bp:1.743
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif167.2
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets56.2 +/- 24.8bp
Average Position of motif in Background47.7 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGCCTGAGTGYCA--
---BTGABTGACAGS
 A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGCCTGAGTGYCA
--CTTGAGTGGCT
 A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGCCTGAGTGYCA--
---NTGATTGACAGN
 A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCCTGAGTGYCA
-GCCTCAGGGCAT
 A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTGAGTGYCA
WTGSCCTSAGGS---
 A C G T A C G T A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGCCTGAGTGYCA
---TTGATTGN--
 A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTGAGTGYCA
GTGGCGTGACNG---
 A C G T A C G T A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGCCTGAGTGYCA---
----TGAGTGACAGSC
 A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCCTGAGTGYCA
---CTAATKGV--
 A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCCTGAGTGYCA
TGCGTG-------
 A C T G A T C G T A G C A T G C A C G T C T A G C G T A C A T G A C G T A C T G A G C T G T A C T G C A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T