Information for 13-GGGGACATAA (Motif 35)

A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T G T C A A C G T A C T G C A G T A T G C A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.137e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif112.2
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets53.9 +/- 23.5bp
Average Position of motif in Background52.1 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGGACATAA---
ARGAGGMCAAAATGW
 A C G T A C G T A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGGACATAA
TGGGGA-----
 A C G T A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGGACATAA----
CGAAGCACACAAAATA
 A C G T A C G T A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGACATAA--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGGACATAA-----
AAAGGTAATAAAATTT
 A C G T A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGGGACATAA--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGGGACATAA--
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGGACATAA--
-AAGCCATAAAA
 A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGGACATAA
CCAGGAACAG--
 A C G T A C G T A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGGGACATAA-------
ACGGCCATAAAATTAAT
 A C T G A C T G A C T G A T C G G T C A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T