Information for 17-CAGCACTCTACAG (Motif 34)

A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T C T G A A C T G C G T A A C T G A C G T A C T G A G T C A C G T C T A G
p-value:1e-5
log p-value:-1.157e+01
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 22.3bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGCACTCTACAG
-NSCACTYVAV--
 A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGCACTCTACAG
MRSCACTYAA---
 A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGCACTCTACAG
-RSCACTYRAG--
 A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGCACTCTACAG
AASCACTCAA---
 A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGCACTCTACAG
AAGCACTTAA---
 A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAGCACTCTACAG
AGCCACTCAAG--
 A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGCACTCTACAG-
--SSAATCCACANN
 A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCACTCTACAG
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGCACTCTACAG
-TCCAATCCACA-
 A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGCACTCTACAG
--CCACTTGAA--
 A G T C C G T A C T A G A G T C C G T A A G T C A C G T A G T C A G C T C G T A A G T C C G T A A C T G
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T