Information for 1-GACTGTGAGA (Motif 16)

A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A
Reverse Opposite:
A G C T A G T C G C A T A G T C C G T A A G T C C G T A A C T G A G C T A G T C
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.822
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif7.32%
Number of Background Sequences with motif471.4
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets48.7 +/- 26.6bp
Average Position of motif in Background51.1 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GACTGTGAGA
-GCTGTG---
 A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACTGTGAGA
NNNANTGA----
 A C G T A C G T A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GACTGTGAGA
NTGGAATGTG---
 A C G T A C G T A C G T A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GACTGTGAGA-
-AAGGTGTKAA
 A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GACTGTGAGA--
--AGGTGTGAAM
 A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GACTGTGAGA
NTGGAATGTN---
 A C G T A C G T A C G T A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GACTGTGAGA----
-AAGGTGTGAAAAT
 A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GACTGTGAGA-
-AAGGTGTGAA
 A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A A C G T
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GACTGTGAGA
TWGTCTGV----
 A C G T A C G T A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GACTGTGAGA
TGGAATGT----
 A C G T A C G T A C T G C T G A G T A C A C G T A C T G C G A T C T A G C G T A C T A G C T G A
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T