Information for 1-AGCACCGACACGG (Motif 6)

C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G
Reverse Opposite:
A G T C A T G C C T A G A G C T A C T G A C G T A G T C A C T G C T A G A C G T A C T G A G T C A G C T
p-value:1e-9
log p-value:-2.176e+01
Information Content per bp:1.727
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif21.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.5 +/- 22.1bp
Average Position of motif in Background48.1 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCACCGACACGG
CAGCC---------
 A C G T C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGCACCGACACGG
---CCAGACRSVB
 C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCACCGACACGG--
CAAATCCAGACATCACA
 A C G T A C G T C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZBTB7C/MA0695.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGCACCGACACGG
GCGACCACCGAA----
 A C G T A C G T A C G T C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGCACCGACACGG
GCGACCACCGAA----
 A C G T A C G T A C G T C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGCACCGACACGG
AGCGGCACACACGCAA
 A C G T A C G T A C G T C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGCACCGACACGG--
CGTATCGAAACCAAA
 C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGCACCGACACGG
---CCAGACAG--
 C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGCACCGACACGG
GGACCACCCACG---
 A C G T A C G T C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGCACCGACACGG-
ATAAACCGAAACCAA
 A C G T C T G A C T A G A G T C G T C A A G T C G T A C C T A G C G T A T A G C C T G A A G T C A T C G T C A G A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A