Information for 24-GCCCTGGATGGCG (Motif 40)

A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G A C T G A G T C
p-value:1e-2
log p-value:-5.551e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 25.3bp
Average Position of motif in Background57.0 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCCCTGGATGGCG---
-----TAATGGCGGNC
 A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCCTGGATGGCG--
---CAAGATGGCGGC
 A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Atf3/MA0605.1/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCCCTGGATGGCG-
------GATGACGT
 A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCCCTGGATGGCG-------
---NAGANTGGCGGGGNGNA
 A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Znf423/MA0116.1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTGGATGGCG
GCACCCCTGGGTGCC-
 A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGGATGGCG
TGCCCAGNHW----
 A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCCTGGATGGCG--
---CAAGATGGCGGC
 A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCCCTGGATGGCG
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCCCTGGATGGCG--
GTCATGCHTGRCTGS
 A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGGATGGCG
TNCCATATATGG--
 A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C T G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T