Information for 10-YYRACTAGTT (Motif 33)

A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T
Reverse Opposite:
G T C A C T G A A T G C A C G T C G T A A C T G A C G T A G C T C T G A T C G A
p-value:1e-4
log p-value:-1.005e+01
Information Content per bp:1.794
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif159.7
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets47.1 +/- 27.5bp
Average Position of motif in Background53.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----YYRACTAGTT---
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-YYRACTAGTT
GTTAACTAGN-
 A C G T A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----YYRACTAGTT--
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C G T A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0092.1_Lhx2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----YYRACTAGTT--
NNNNNCTAATTAGTTTA
 A C G T A C G T A C G T A C G T A C G T A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T A C G T A C G T
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A

PH0028.1_En1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---YYRACTAGTT---
GNATTAATTAGTTNNC
 A C G T A C G T A C G T A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T A C G T A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--YYRACTAGTT---
GAGCAACAGGTGGTT
 A C G T A C G T A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

LBX1/MA0618.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:YYRACTAGTT
TTAATTAG--
 A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--YYRACTAGTT-
ATGCAACAGGTGG
 A C G T A C G T A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---YYRACTAGTT----
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:YYRACTAGTT-
--AACAGGTGT
 A G C T A G C T T C G A G T C A A G T C C G A T C G T A A T C G A G C T A C G T A C G T
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T