Information for 9-TTTMCGASAT (Motif 32)

A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T
Reverse Opposite:
C G T A A C G T A T C G A C G T A G T C A C T G A C G T C T G A C G T A C G T A
p-value:1e-4
log p-value:-1.042e+01
Information Content per bp:1.854
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.5 +/- 24.8bp
Average Position of motif in Background65.5 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TTTMCGASAT--
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:2
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----TTTMCGASAT--
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----TTTMCGASAT--
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0076.1_Hoxd11/Jaspar

Match Rank:4
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----TTTMCGASAT--
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0067.1_Hoxc12/Jaspar

Match Rank:5
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----TTTMCGASAT--
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----TTTMCGASAT--
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TTTMCGASAT
NTTTTACGACC-
 A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----TTTMCGASAT--
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----TTTMCGASAT--
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TTTMCGASAT
NTTTTACGACC-
 A C G T A C G T A C G T A C G T A G C T G T C A A G T C A C T G C G T A A T G C G T C A A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T