Information for 19-TSTGTGWGWGAGAGAS (Motif 31)

A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G
Reverse Opposite:
A T G C A C G T A G T C A C G T A G T C A C G T A G T C C G A T A G T C C G T A A G T C C G T A A G T C C G T A A T G C C G T A
p-value:1e-5
log p-value:-1.180e+01
Information Content per bp:1.903
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 17.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TSTGTGWGWGAGAGAS
----TGAGTGACAGSC
 A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TSTGTGWGWGAGAGAS
TGCGTGGGYG------
 A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TSTGTGWGWGAGAGAS-
-----AGGTGHCAGACA
 A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TSTGTGWGWGAGAGAS
---NTGATTGACAGN-
 A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TSTGTGWGWGAGAGAS
---AGGTGNCAGACAG
 A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TSTGTGWGWGAGAGAS--
---NNNACCGAGAGTNNN
 A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TSTGTGWGWGAGAGAS
---BTGABTGACAGS-
 A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TSTGTGWGWGAGAGAS
NGCGTGGGCGGR----
 A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TSTGTGWGWGAGAGAS
---GTGGGGGAGGGG-
 A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G
A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----TSTGTGWGWGAGAGAS
NNNNTTGTGTGCTTNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C G T A C T G C G A T A C T G C G T A A C T G C G T A A C T G C G T A A C T G C G T A A T C G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T