Information for 5-GGACCACRCG (Motif 27)

A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A T C G C G A T A C T G A C T G A G C T A G T C A G T C
p-value:1e-5
log p-value:-1.253e+01
Information Content per bp:1.895
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif102.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets41.0 +/- 22.3bp
Average Position of motif in Background53.6 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGACCACRCG--
GGACCACCCACG
 A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGACCACRCG-
GCGACCACACTG
 A C G T A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGACCACRCG---
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Klf12/MA0742.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGACCACRCG------
-GACCACGCCCTTATT
 A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGACCACRCG--
--GGCACGCGTC
 A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G A C G T A C G T
A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0043.1_Max_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGACCACRCG------
TGACCACGTGGTCGGG
 A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGACCACRCG
--GCCACGTG
 A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGACCACRCG
----CACGCA
 A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

MAX::MYC/MA0059.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGACCACRCG---
--ACCACGTGCTC
 A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGACCACRCG---
TATCGACCCCCCACAG
 A C G T A C G T A C G T A C T G A C T G C T G A A G T C A G T C C G T A A T G C C T A G A G T C A C T G A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G