Information for 14-GHAACAATCHACA (Motif 24)

C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T C A T G A C T G C G T A A C G T A C G T A C T G A G C T A C G T C T G A A G T C
p-value:1e-5
log p-value:-1.311e+01
Information Content per bp:1.809
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif22.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.3 +/- 27.4bp
Average Position of motif in Background52.4 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GHAACAATCHACA--
---SSAATCCACANN
 C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GHAACAATCHACA
--TCCAATCCACA
 C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GHAACAATCHACA
-NAACAAT-----
 C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GHAACAATCHACA
--AACAAT-----
 C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GHAACAATCHACA
---CCAATCAA--
 C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GHAACAATCHACA
CCATCAATCAAA-
 C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GHAACAATCHACA
-MRSCACTYAA--
 C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GHAACAATCHACA
--NSCACTYVAV-
 C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GHAACAATCHACA
TTTAGAACAATAAAAT
 A C G T A C G T A C G T C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GHAACAATCHACA
-AGCCACTCAAG-
 C T A G G A C T C G T A C T G A A G T C C G T A G T C A A C G T A G T C G A T C C G T A A G T C C G T A
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T