p-value: | 1e-7 |
log p-value: | -1.638e+01 |
Information Content per bp: | 1.911 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 1.61% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 50.5 +/- 37.1bp |
Average Position of motif in Background | 53.3 +/- 26.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 1 |
Score: | 0.75 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CSMAAACAATGGGAGT --VRAACAATGG---- |
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SOX9/MA0077.1/Jaspar
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CSMAAACAATGGGAGT ---GAACAATGG---- |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.71 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CSMAAACAATGGGAGT ---GAACAATGGN--- |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CSMAAACAATGGGAGT ---RAACAATGGN--- |
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Sox6/MA0515.1/Jaspar
Match Rank: | 5 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CSMAAACAATGGGAGT --AAAACAATGG---- |
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Sox2/MA0143.3/Jaspar
Match Rank: | 6 |
Score: | 0.68 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CSMAAACAATGGGAGT ----AACAAAGG---- |
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PB0132.1_Hbp1_2/Jaspar
Match Rank: | 7 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CSMAAACAATGGGAGT- NNTNNACAATGGGANNN |
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SOX21/MA0866.1/Jaspar
Match Rank: | 8 |
Score: | 0.67 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CSMAAACAATGGGAGT--- ----AACAATGGTAGTGTT |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 9 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CSMAAACAATGGGAGT CTCACACAATGGCGC- |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 10 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CSMAAACAATGGGAGT --RNAACAATGG---- |
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