Information for 11-WGAWRCTSCTCTSTKT (Motif 13)

C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T
Reverse Opposite:
C G T A G T A C C G T A A T G C C G T A A C T G C G T A A C T G A T G C C G T A A C T G A G T C C G A T A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.856
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 34.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:WGAWRCTSCTCTSTKT
AGATGCTRCTRCCHT-
 C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:WGAWRCTSCTCTSTKT----
----ANTCCTTTGTCTNNNN
 C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-WGAWRCTSCTCTSTKT
NAGATWNBNATCTNN--
 A C G T C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:WGAWRCTSCTCTSTKT
--AGGVNCCTTTGT--
 C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T
A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.50
Offset:7
Orientation:forward strand
Alignment:WGAWRCTSCTCTSTKT-
-------CCTTTGTTTT
 C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

GATA2/MA0036.2/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:WGAWRCTSCTCTSTKT
AGATTCTTATCTGT--
 C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:WGAWRCTSCTCTSTKT
---CNGTCCTCCC---
 C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:WGAWRCTSCTCTSTKT-------
--------CTTTGTTTACTTTTN
 C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--WGAWRCTSCTCTSTKT
TACGAGACTCCTCTAAC-
 A C G T A C G T C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:WGAWRCTSCTCTSTKT--
---GYCTGGYYTNTGTCA
 C G A T A C T G C G T A C G T A C T A G A G T C A C G T A T C G A G T C A C G T A G T C A C G T A T C G A C G T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A