Information for 25-GGGCCCGCGSKGG (Motif 42)

T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G
Reverse Opposite:
T G A C A G T C G T A C T A G C A T G C T A C G A G T C T C A G A C T G T A C G A T G C G A T C A T G C
p-value:1e-3
log p-value:-9.084e+00
Information Content per bp:1.605
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif328.3
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets42.2 +/- 24.1bp
Average Position of motif in Background49.6 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGGCCCGCGSKGG
GGGGCCCAAGGGGG
 A C G T T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGGCCCGCGSKGG-
CACCCCCGGGGGGG
 T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGGCCCGCGSKGG---
-CCCCCCCGGGGGGGT
 T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G A C G T A C G T A C G T
A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGCCCGCGSKGG--
NCCCCCCCGGGGGGN
 T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGCCCGCGSKGG-
-TGCCCTGAGGGCA
 T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGCCCGCGSKGG-
-TGCCCTGAGGGCA
 T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGCCCGCGSKGG-
-TGCCCTNAGGGCA
 T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCCGCGSKGG
CAGGCCNNGGCCNN
 A C G T T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGCCCGCGSKGG-----
-ANTNCCGGGGGGAANTT
 T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GGGCCCGCGSKGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G C A T G T A C G A T G C T G A C A G T C T C A G A T G C A T C G A T C G C A T G C T A G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C