Information for 15-TCARTGACCT (Motif 40)

A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T
Reverse Opposite:
C G T A A T C G A C T G C G A T A G T C C G T A A G T C A C G T A C T G C G T A
p-value:1e-4
log p-value:-9.541e+00
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif50.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets38.2 +/- 29.9bp
Average Position of motif in Background47.8 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---TCARTGACCT-
AGGTCANTGACCTN
 A C G T A C G T A C G T A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:TCARTGACCT--
----TGACCTYA
 A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TCARTGACCT-
---GTGACCTT
 A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TCARTGACCT
----TGACCT
 A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TCARTGACCT----
----TGACCTTGAT
 A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TCARTGACCT---
---NTGACCTTGA
 A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TCARTGACCT--
----TGACCYCT
 A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TCARTGACCT---
---ATGACCTTGA
 A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0005.1_Bbx_1/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TCARTGACCT-
TAATTCAATGAAGTG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCARTGACCT---
--NATGACCTTGA
 A C G T A G T C C G T A C T A G A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A