Information for 23-GGAATATTCTRCC (Motif 37)

C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C
Reverse Opposite:
A C T G C T A G A G C T C G T A T A C G C G T A C G T A C A G T C G T A A C G T A G C T A G T C G T A C
p-value:1e-4
log p-value:-1.107e+01
Information Content per bp:1.774
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif33.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets55.3 +/- 29.9bp
Average Position of motif in Background48.4 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGAATATTCTRCC-
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGAATATTCTRCC
TTCTAGAABNTTCTA--
 A C G T A C G T A C G T A C G T C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGAATATTCTRCC
ATGAATATTC----
 A C G T C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGAATATTCTRCC-
-GAACGTTCTAGAA
 C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C A C G T
A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGAATATTCTRCC-
-GAANGTTCTAGAA
 C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C A C G T
A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

HSF4/MA0771.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGAATATTCTRCC-
-GAANNTTCTAGAA
 C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C A C G T
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGAATATTCTRCC
NNTNNCAATATTAG---
 A C G T A C G T A C G T A C G T C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGAATATTCTRCC
NNTNNCAATATTAG---
 A C G T A C G T A C G T A C G T C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAATATTCTRCC--
AGATGCTRCTRCCHT
 C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGAATATTCTRCC
ATGMATATDC----
 A C G T C A T G C T A G C T G A G T C A C G A T G T C A A C G T C G A T A T G C A C G T T C G A A G T C G T A C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T