Information for 22-GKRAAARSAAAGA (Motif 36)

A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A
Reverse Opposite:
A C G T G T A C A C G T A C G T A C G T A T C G A G C T A C G T A C G T A C G T A G C T G T C A A G T C
p-value:1e-4
log p-value:-1.123e+01
Information Content per bp:1.867
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.0 +/- 29.1bp
Average Position of motif in Background49.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GKRAAARSAAAGA----
ATAAGAACAAAGGACTA
 A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GKRAAARSAAAGA
---AAAACAAAGG
 A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GKRAAARSAAAGA----
AGAAGAACAAAGGACTA
 A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GKRAAARSAAAGA--
GGAAANTGAAACTNA
 A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GKRAAARSAAAGA
-AGAAACGAAAGT
 A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GKRAAARSAAAGA
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GKRAAARSAAAGA
-GAAAMTGAAACT
 A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GKRAAARSAAAGA---
----AAACAAACATTC
 A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GKRAAARSAAAGA
---AAAACAATGG
 A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GKRAAARSAAAGA
---AAAGTAAACA
 A C T G A C G T C T G A C G T A C G T A C G T A C T G A A T G C C G T A C G T A G T C A A C T G C G T A
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A