Information for 4-GAGGTGGGCTTTC (Motif 11)

A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A C A T G G T A C A G T C A G T C C G T A A G T C A G T C A C G T A T G C
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.941
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.8 +/- 24.4bp
Average Position of motif in Background59.7 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GAGGTGGGCTTTC-
----GGGGATTTCC
 A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGGTGGGCTTTC-
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGGTGGGCTTTC-
----GGGAATTTCC
 A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GAGGTGGGCTTTC-
----GGGGATTTCC
 A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGGTGGGCTTTC---
NNATTGGACTTTNGNN
 A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAGGTGGGCTTTC
ACAGGATGTGGT-----
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGGGCTTTC
NNCAGGTGNN-----
 A C G T A C G T A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGGTGGGCTTTC
CAGGTGAGG----
 A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAGGTGGGCTTTC--
---NGGGGATTTCCC
 A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGGTGGGCTTTC
AGGGGGCGGGGCTG-
 A C G T A C G T A T C G C G T A A C T G A C T G A C G T C T A G A C T G A C T G G T A C A C G T A C G T A C G T A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T