Information for 9-TGTTATAATAAGCATT (Motif 10)

A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T A C T G G T A C C G A T A C G T G T C A A C G T A C G T C G T A A C G T C G T A C G T A G T A C C G T A
p-value:1e-8
log p-value:-2.056e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 21.1bp
Average Position of motif in Background53.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGTTATAATAAGCATT
TATAATTATAATATTC---
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTTATAATAAGCATT
NNNTTTNTAATACNG---
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTTATAATAAGCATT
TAAGATTATAATACGG---
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTTATAATAAGCATT
GCTAATTATAATTATC---
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGTTATAATAAGCATT-
------AATAAACAATN
 A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PB0129.1_Glis2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGTTATAATAAGCATT
TCTTTANTAATANN----
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGTTATAATAAGCATT
TTTAATTATAATTAAG---
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGTTATAATAAGCATT
----NTAATGAGCT--
 A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGTTATAATAAGCATT--
-----AAATTAGCATAAT
 A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGTTATAATAAGCATT-
-----TAATTTGCATAA
 A C G T A C T G A C G T A C G T C G T A C G A T C G T A C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A