p-value: | 1e-5 |
log p-value: | -1.277e+01 |
Information Content per bp: | 1.893 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.60% |
Number of Background Sequences with motif | 12.3 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 60.4 +/- 28.5bp |
Average Position of motif in Background | 46.7 +/- 21.6bp |
Strand Bias (log2 ratio + to - strand density) | 2.6 |
Multiplicity (# of sites on avg that occur together) | 1.40 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TCTGTCTCTGTCT-- -------CTGTCTGG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TCTGTCTCTGTCT-- -----VBSYGTCTGG |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TCTGTCTCTGTCT ANTCCTTTGTCTNNNN-- |
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PRDM1/MA0508.1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTGTCTCTGTCT TCACTTTCACTTTCN |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCTGTCTCTGTCT------- ---NNTNNTGTCTGGNNTNG |
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PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCTGTCTCTGTCT ACTTTCACTTTC- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TCTGTCTCTGTCT-- -------TWGTCTGV |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | TCTGTCTCTGTCT- -------NTGTCAN |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCTGTCTCTGTCT- -CTGTCTGTCACCT |
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IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCTGTCTCTGTCT ACTTTCACTTTC- |
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