Information for 14-TGATGCATGC (Motif 29)

C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
Reverse Opposite:
A C T G T A G C T C G A A G C T A C T G A T G C C G T A G A C T A G T C C G T A
p-value:1e-6
log p-value:-1.488e+01
Information Content per bp:1.847
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif82.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets47.2 +/- 27.5bp
Average Position of motif in Background48.0 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGATGCATGC
NTTGATACATT-
 A C G T A C G T C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGATGCATGC-
ATGATKGATGRC
 A C G T C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGATGCATGC
MTGATGCAAT-
 A C G T C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGATGCATGC
ATGATGCAAT-
 A C G T C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TGATGCATGC
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGATGCATGC
TGATTGATGA
 C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGATGCATGC
NATGTTGCAA--
 A C G T A C G T C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGATGCATGC
TGTGACTCATT-
 A C G T A C G T C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGATGCATGC
GGATGATGCAATA
 A C G T A C G T A C G T C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGATGCATGC
GGTGACTCATC-
 A C G T A C G T C G A T A C T G C T G A A C G T T A C G A G T C C T G A A G C T A T C G A G T C
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T