Information for 17-CCAGGCACTAGAC (Motif 26)

A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G C T C G T A A T C G C G A T A C T G A G T C A G T C A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.662e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 14.1bp
Average Position of motif in Background30.4 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAGGCACTAGAC-------
YCAGGCWCAGTACCAGGCTC
 A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAGGCACTAGAC--
BCNGGTTCTAGANCN
 A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGCACTAGAC
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAGGCACTAGAC---
TAAGCCACTTGAAATT
 A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCAGGCACTAGAC
CCAGACAG-----
 A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCAGGCACTAGAC
---NSCACTYVAV
 A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGCACTAGAC
ANCAGGATGT----
 A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGCACTAGAC
TGCCCAGNHW------
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCAGGCACTAGAC---
CTAAGGTTCTAGATCAC
 A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCAGGCACTAGAC---
TAAGCCACTTGAAATT
 A G T C A G T C C G T A A C T G A C T G A G T C C G T A A T G C A C G T C T G A A C T G C G T A A G T C A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T