Information for 8-GGGCTTGCCC (Motif 17)

T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C
Reverse Opposite:
C A T G T A C G T A C G T G A C T C G A T C G A T C A G G A T C A G T C A G T C
p-value:1e-8
log p-value:-2.011e+01
Information Content per bp:1.537
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.05%
Number of Background Sequences with motif825.2
Percentage of Background Sequences with motif1.74%
Average Position of motif in Targets52.3 +/- 26.8bp
Average Position of motif in Background50.5 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGCTTGCCC
GGGGATTTCC-
 A C G T T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTTGCCC-
GGGGATTCCCCC
 A C G T T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGCTTGCCC
NGGGGATTTCCC
 A C G T A C G T T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGCTTGCCC
GGGGATTTCC-
 A C G T T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGCTTGCCC
GGGAATTTCC-
 A C G T T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGCTTGCCC-
AGGGGATTCCCCT
 A C G T A C G T T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

Klf12/MA0742.1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCTTGCCC
NANAAGGGCGTGGTC
 A C G T A C G T A C G T A C G T A C G T T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGCTTGCCC------
GGGTGTGCCCAAAAGG
 T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTTGCCC
AAGGGGGCGTGGCC
 A C G T A C G T A C G T A C G T T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGCTTGCCC-
NNACTTGCCTT
 T C A G T C A G C T A G A G T C A G C T A C G T A C T G A T G C A T G C G T A C A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T