Information for 1-RGTCCCRMCTGCA (Motif 1)

C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C C G T A A C T G A C G T A G T C A C T G A C T G A T C G C G T A A G T C A G C T
p-value:1e-16
log p-value:-3.688e+01
Information Content per bp:1.872
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.1 +/- 20.6bp
Average Position of motif in Background48.8 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RGTCCCRMCTGCA-
--SNGCACCTGCHS
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:RGTCCCRMCTGCA
---NNCACCTGNN
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RGTCCCRMCTGCA--
-GTGCCGTGTGCAAA
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A A C G T A C G T
A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RGTCCCRMCTGCA---
-CGACCAACTGCCGTG
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RGTCCCRMCTGCA
GGTCCCGCCC---
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RGTCCCRMCTGCA---
-GCCCCGCCCCCTCCC
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RGTCCCRMCTGCA
-TTCCCGCCWG--
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RGTCCCRMCTGCA
---CGCACCTGCT
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RGTCCCRMCTGCA
---AACACCTGCT
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A
A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:RGTCCCRMCTGCA
--CCTCACCTG--
 C T G A A C T G A C G T A T G C A G T C A G T C C T A G G T C A A G T C A C G T A C T G A G T C C G T A
A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T