Information for 15-TTCATAGACG (Motif 45)

C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G
Reverse Opposite:
A G T C A C T G A G C T A G T C A C G T G T C A C G A T A C T G C G T A C G T A
p-value:1e-7
log p-value:-1.709e+01
Information Content per bp:1.917
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.2 +/- 26.1bp
Average Position of motif in Background41.5 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTCATAGACG
NTTTCTNAGAAA
 A C G T A C G T C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTCATAGACG---
TTTCCTAGAAAGCA
 A C G T C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G A C G T A C G T A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

PB0179.1_Sp100_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTCATAGACG--
NNTTTANNCGACGNA
 A C G T A C G T A C G T C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G A C G T A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTCATAGACG
ATTTCCAAGAA-
 A C G T A C G T C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCATAGACG
ACATCAAAGG--
 A C G T A C G T C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------TTCATAGACG
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCATAGACG--
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G A C G T A C G T
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTCATAGACG---
---CCAGACRSVB
 C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0005.1_Bbx_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTCATAGACG--
TAATTCAATGAAGTG
 A C G T A C G T A C G T C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTCATAGACG
NNNTTTCCTGGAAA
 A C G T A C G T A C G T A C G T C G A T A C G T A G T C C G T A C A G T C G T A A C T G C T G A A G T C A C T G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A