Information for 24-GGGCRGCGCCGCWGCC (Motif 40)

A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G C T A G A G T C C G A T A C T G A G T C A C T G A T C G G T A C T A C G A G T C A G C T A C T G A G T C G T A C A T G C
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.782
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.6 +/- 13.8bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGGCRGCGCCGCWGCC
----GGCCCCGCCCCC
 A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GGGCRGCGCCGCWGCC
AGGGGGCGGGGCTG-----
 A C G T A C G T A C G T A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:3
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGGCRGCGCCGCWGCC---
----ANTGCCTGAGGCAAN
 A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGGCRGCGCCGCWGCC-
--AAGGKGRCGCAGGCA
 A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGGCRGCGCCGCWGCC--
----GGGGCCGAGGCCTG
 A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGGCRGCGCCGCWGCC
-----NNGCAGCTGTC
 A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GGGCRGCGCCGCWGCC
------CGCAGCTGCG
 A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GGGCRGCGCCGCWGCC-
-----GCTCCGCCCMCY
 A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GGGCRGCGCCGCWGCC
----NNAGCAGCTGCT
 A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GGGCRGCGCCGCWGCC
--GCGCATGCGCAG--
 A T C G C A T G A C T G T G A C C T G A A C T G A G T C A C T G A T G C A G T C A C T G A G T C C G T A A C T G A G T C A G T C
A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T