Information for 3-GCAGGGTATATGAAGC (Motif 8)

C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C
Reverse Opposite:
T C A G A G T C C G A T A G C T A G T C T C G A G C A T C G T A C G A T C G T A G A T C T A G C A G T C A C G T A T C G G A T C
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.729
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 15.4bp
Average Position of motif in Background67.8 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:GCAGGGTATATGAAGC
----------NGAAGC
 C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCAGGGTATATGAAGC
-AAGGATATNTN----
 C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGGTATATGAAGC
CACAGN-----------
 A C G T C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.46
Offset:10
Orientation:reverse strand
Alignment:GCAGGGTATATGAAGC
----------CGGAGC
 C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.46
Offset:4
Orientation:forward strand
Alignment:GCAGGGTATATGAAGC
----GCTAAACGGT--
 C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C
A C G T A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:GCAGGGTATATGAAGC---
----GGAAANTGAAACTNA
 C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.46
Offset:2
Orientation:forward strand
Alignment:GCAGGGTATATGAAGC
--AGGGTAACAGC---
 C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:8
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGGTATATGAAGC
TTCNAAGTACTTNNNNN
 A C G T C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.45
Offset:4
Orientation:forward strand
Alignment:GCAGGGTATATGAAGC--
----GAGAACCGAAACTG
 C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGGTATATGAAGC
NACAGGAAAT-------
 A C G T C T A G A T G C C G T A C T A G A C T G C A T G A C G T C G T A G A C T C G T A A C G T A C T G C T G A C G T A C T A G A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T