Information for 1-TTGGAGTGCA (Motif 4)

G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A
Reverse Opposite:
C G A T A C T G G A T C G C T A G A T C G A C T A T G C A G T C G T C A C T G A
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.664
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif7.00%
Number of Background Sequences with motif580.2
Percentage of Background Sequences with motif2.00%
Average Position of motif in Targets56.9 +/- 26.2bp
Average Position of motif in Background52.3 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGGAGTGCA
BTBRAGTGSN
 G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGGAGTGCA
NTCAAGTGG-
 G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGGAGTGCA
CTYRAGTGSY
 G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGGAGTGCA---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGGAGTGCA-
-TTGAGTGSTT
 G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGGAGTGCA---
-GGGATTGCATNN
 G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGGAGTGCA-
-TTRAGTGSYK
 G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGGAGTGCA
-TGGAATGT-
 G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGGAGTGCA
NCTGGAATGC-
 A C G T G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGGAGTGCA-
CTTGAGTGGCT
 G A C T C A G T T C A G T A C G C T G A C T A G C G A T C T A G T G A C G C T A A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T