Information for 3-AATAGAATGGAGA (Motif 11)

C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A G T C A G T C G T C A C G A T A C G T A G T C A G C T G T C A A C G T A C G T
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.8 +/- 14.8bp
Average Position of motif in Background67.0 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATAGAATGGAGA--
-GGAGAAAGGTGCGA
 C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AATAGAATGGAGA--
-----AATGGAAAAT
 C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AATAGAATGGAGA-
TATTATGGGATGGATAA
 A C G T A C G T A C G T C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AATAGAATGGAGA---
--GAGAACCGAAACTG
 C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AATAGAATGGAGA
CCAAAAATAG--------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------AATAGAATGGAGA
ATGCTAAAAATAGAA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AATAGAATGGAGA
TAGGTAATAAAATTCA--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AATAGAATGGAGA
AATGCAATAAAATTTAT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AATAGAATGGAGA
ATTTGCATACAATGG---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AATAGAATGGAGA
AAAACAATGG---
 C G T A C G T A A C G T C T G A A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C T G C T G A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T