Information for 24-CGTGAGGCCGGTC (Motif 39)

A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A C T G A C T G A G T C A G T C A C G T A G T C C G T A A G T C A C T G
p-value:1e-5
log p-value:-1.218e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 30.7bp
Average Position of motif in Background36.0 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGTGAGGCCGGTC
---GAGSCCGAGC
 A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGTGAGGCCGGTC
--CTAGGCCT---
 A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGTGAGGCCGGTC-
--TGACACCTGTCA
 A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T
A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CGTGAGGCCGGTC
ATGCCCTGAGGC-----
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGTGAGGCCGGTC----
---CAGGCCNNGGCCNN
 A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGTGAGGCCGGTC
NGCCTGAGGCN----
 A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGTGAGGCCGGTC
GGGNGGGGGCGGGGC
 A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PKNOX1/MA0782.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGTGAGGCCGGTC-
--TGACACCTGTCA
 A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T
A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CGTGAGGCCGGTC
----AGGCCTNG-
 A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CGTGAGGCCGGTC
WTGSCCTSAGGS-----
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T