Information for 23-AGGTATTAATAGC (Motif 38)

C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C
Reverse Opposite:
A C T G A T G C A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T G C A G T C C G A T
p-value:1e-5
log p-value:-1.218e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.2 +/- 21.5bp
Average Position of motif in Background23.8 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGGTATTAATAGC
-GCTATAAATAGC
 C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGGTATTAATAGC
-TCTATTTATAGN
 C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGGTATTAATAGC
--ATATTAATTAA
 C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C
A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGGTATTAATAGC
-TCTATTTTTAGA
 C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C
A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGGTATTAATAGC----
-TTTATTAATTGCNNGN
 C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

Hoxd8/MA0910.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGTATTAATAGC--
TAAATAATTAATGGCTA
 A C G T A C G T C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGTATTAATAGC--
TAAATAATTAATGGCTA
 A C G T A C G T C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGGTATTAATAGC
-GCTATTTTTAGC
 C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGGTATTAATAGC-
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGTATTAATAGC
AGGTGTTAAT---
 C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T