Information for 8-CGAATCTCAT (Motif 36)

A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C T G
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 17.1bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGAATCTCAT----
TNGAATTTCATTNAN
 A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CGAATCTCAT
CAAAATCGAAACTAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGAATCTCAT
CAAATCACTG
 A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGAATCTCAT-------
GCAACCTCATTATNNNN
 A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGAATCTCAT--
NTAATBNAATTA
 A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGAATCTCAT--
-AAATCACAGCA
 A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGAATCTCAT--
YTAATYNRATTA
 A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CGAATCTCAT
ATAAACCGAAACCAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGAATCTCAT-
CTAATCCTCTT
 A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGAATCTCAT-------
NNNACCTCATTATCNTN
 A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C